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Systembiologie - Homepage
maintained by Dr. J. Doutheil at Dechema, Frankfurt am Main, Germany
Reviews
Nature: Insight Computational Biology
(London)
BioEssays: Special Issue on Modeling Complex Biological Systems
(New York)
Genetic networks literature review
(Utrecht)
Bayesian networks for analyzing gene expression data
(Dundee)
Analysis of Gene Expression Data, DNA Chips and Gene Networks
(Tel Aviv)
Caltech Systems Biology Short Course
(Pasadena)
Groups in Germany
Intelligent Bioinformatics Systems Division
(Roland Eils) at the German Cancer Research Center, Heidelberg
Data Analysis and Modeling of Dynamic Processes in the Life Sciences
(Jens Timmer) at the University of Freiburg
Systems Biology & Bioinformatics
(Olaf Wolkenhauer) at the University of Rostock
Systems Biology Group
(Ernst Dieter Gilles) at the Max Planck Institute for Dynamics of Complex Technical Systems
Systems Biology Group
at the University of Stuttgart
Theoretical Systems Biology Group
(Thomas Wilhelm) at the Institute of Molecular Biotechnology, Jena
Biosystems Analysis Group
(Peter Dittrich) at the University of Jena
Biochemical Networks Group
(Stefan Schuster) at the University of Jena
Complex Systems and Biological Networks
(Stefan Bornholdt) at the University of Leipzig
EML Research Heidelberg
(Ursula Kummer/Rebecca Wade) at Heidelberg
Comparative Genome Analysis
(Peer Bork) at EMBL Heidelberg
Soft Matter and Biological Physics
(Ulrich Schwarz) at MPI of Colloids and Interfaces (Golm)
Kinetic Modelling Group
(Edda Klipp) at MPI of Molecular Genetics (Berlin)
Groups World-Wide
Computational Systems Biology Group
(Peter Spirtes) in Pittsburgh, Pennsylvania
Biochemical Networks Modeling Group
(Pedro Mendes) at the Virginia Bioinformatics Institute
Computational Systems Biology Group
(Reinhard Laubenbacher) at the Virginia Bioinformatics Institute
Evolution of Molecular Networks group
(Andreas Wagner) at the University of New Mexico
Systems biology group
(Trey Idekeker) at the Whitehead Institute for Biomedical Research, Cambridge (USA)
Computational Cell Biology
(Dennis Bray) at the University of Cambridge (UK)
STRC Biocomputation Group
(Hamid Bolouri) at the University of Hertfordshire
Computational Molecular Biology
(Ron Shamir) at the University of Tel Aviv
Complex Systems Division
(Carsten Peterson) at the University of Lund
Design Principles of Protein Networks
(Uri Alon) at the Weizmann Institute
Design Principles of Protein Networks
(Naama Barkai) at the Weizmann Institute
Probabilistic Graphical Models
(Daphne Koller) at the University of Stanford
Molecular Biology and Probabilistic Models
(Nir Friedman) at the Hewbrew University of Jerusalem
Systems Optimization Group
(Eckart Zitzler) at the ETH Zürich
Reverse Engineering Project
at the ETH Zürich
Statistical Bioinformatics Group
at the University of Newcastle
Protein Interaction Group
(Benno Schwikowski) at the Systems Biology Institute, Seattle
Systems Biology Center
at TU Delft
Integrative Systems Biology
at TU Denmark
U Ghent
Institute for Advanced Study, Center for Systems Biology
Ron Weiss group, Princeton University
BII Systems Biology Group (Singapore)
UC San Francisco BioSystems Group
Kitano Systems Biology Group
Davidson Lab at Caltech
Bioinformatics & Systems Biology Group at the Burnham Institute (La Jolla)
Virtual Cell Project, U Connecticut
UC Santa Barbara IGERT Program on Systems Biology
UC San Diego Bioinformatics & Systems Biology Groups
UC San Diego Systems Biodynamics Group
Integrated Systems Biology Group at Rensselaer Polytechnic Institute
Institutes and Larger Initiatives
BioSPI Project at Weizmann
BioSPICE
BioMaps Institute at Rutgers:
Institute for Systems Biology, Seattle
Bauer Center for Genomics Research (CGR)
at Harvard University
Systems Biology Department
at Harvard Medical School
Computational and Systems Biology Initiative
at MIT
Bio-X
at Stanford University
Center for Studies in Physics and Biology
at The Rockefeller University
GENSCEND Initiative
of the Wellcome Trust
"Genomes to Life program"
(a funding initiative of the DOE)
"Cell Systems Initiative"
(an initiative of the University of Washington)
"Systems of Life - System Biology"
(a funding initiative of the German Ministry of Education and Research, BMBF)
SFB 618
(funded by the German Research Council DFG)
Systems biology initiative
(Humboldt University)
STAGSIM - Systems Biology
(An Expression of Interest (EoI) submitted to the EU Framework Program VI)
Systems Biology in Sweden
Institute for Computational Biomedicine
at the Weill Medical College of Cornell University.
Pathways/Systems Biology Working Group
at I3C.
Workshops and Conferences
International Conference on Systems Biology 2004
(Heidelberg, October 9 - 13, 2004)
BioDigital 2004
(Freiburg, October 13-15, 2004)
More upcoming bioinformatics and systems biology conferences
Software
Systems Biology Markup Language
(page includes list of software supporting SBML)
Software Download and Model Repository at
www.systems-biology.org
Systems Biology Workbench
Development Group
Cytoscape
(a software platform to visualize molecule interaction networks)
Virtual Cell Simulator
Gene Net
software
Gene-O-Matic
software
Genetic Network Analyzer
Dr. Lothar Terfloth - 2005-04-04